release-updates
action icon

Organism    GO Terms to Gene IDs

For a given organism and gene source, create a table with GO Terms (i.e. GO:XXXXXXX ID) and Gene IDS. There is an option to constrain the output to a specific namespace (Biological Process, Molecular Function or Cellular Component). This query can be used to create a TERM2GENE file for use in GSEA with Bioconductor tools.
  1. Organism > Name
    ?
  2. Gene > Source
    ?
     constrain to be  saved Gene list 
  3. Ontology Term > Namespace
    optional
    ON | OFF
    ?
Perl | Python | Ruby | Java [help] export XML